ProteomeUI

Spatiotemporal Heatmap

Gene set: Show all genes Show only genes present in both RNA and Protein Display mode: Average per timepoint Individual samples (replicates) Sort genes using dataset: RNA Protein Sort genes by metadata: P_VALUE Q_VALUE PERIOD LAG AMPLITUDE OFFSET MEAN_PERIODICITY SCATTER Sort order: Ascending Descending

Which region would you like to look at?

p-psm a-psm Somite Generate Heatmap

GO Term Spatiotemporal Heatmap

GO term (ID or keyword): Search GO term

ⓘ Gene annotations are fetched from EBI QuickGO. Large GO terms may take 1–2 minutes to load — please be patient.

Gene set: Show all genes Show only genes present in both RNA and Protein Display mode: Average per timepoint Individual samples (replicates) Sort genes using dataset: RNA Protein Sort genes by metadata: P_VALUE Q_VALUE PERIOD LAG AMPLITUDE OFFSET MEAN_PERIODICITY SCATTER Sort order: Ascending Descending

Which region would you like to look at?

p-psm a-psm Somite Generate GO heatmap (Spatiotemporal)

Spatiotemporal Data Explorer

ⓘ Be cautious with Top-N preview settings: very high N values (or disabling Top-N preview) can generate very large heatmaps and may freeze or crash your browser.

Which region would you like to look at?

p-psm a-psm Somite Gene set: Show all genes Show only genes present in both RNA and Protein Display mode: Average per timepoint Individual samples (replicates) Significance metric: P_VALUE Q_VALUE Significance threshold: ≤ 0.05 ≤ 0.1 Significant in: Either RNA or Protein Both RNA and Protein RNA only Protein only Heatmap row sort dataset: RNA Protein Heatmap row sort metadata: P_VALUE Q_VALUE PERIOD LAG AMPLITUDE OFFSET MEAN_PERIODICITY SCATTER Heatmap row sort order: Ascending Descending